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Converting a text document with special format to Pandas DataFrame


How can I reverse a list in Python?Add one row to pandas DataFrameSelecting multiple columns in a pandas dataframeUse a list of values to select rows from a pandas dataframeAdding new column to existing DataFrame in Python pandasDelete column from pandas DataFrame by column nameHow to iterate over rows in a DataFrame in Pandas?Select rows from a DataFrame based on values in a column in pandasGet list from pandas DataFrame column headersConvert list of dictionaries to a pandas DataFrame






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12















I have a text file with the following format:



1: frack 0.733, shale 0.700, 
10: space 0.645, station 0.327, nasa 0.258,
4: celebr 0.262, bahar 0.345


I need to covert this text to a DataFrame with the following format:



Id Term weight
1 frack 0.733
1 shale 0.700
10 space 0.645
10 station 0.327
10 nasa 0.258
4 celebr 0.262
4 bahar 0.345


How I can do it?










share|improve this question
























  • I can only think of regex helping here.

    – amanb
    Apr 22 at 19:13







  • 1





    Depending on how large/long your file is, you can loop through the file without pandas to format it properly first.

    – Quang Hoang
    Apr 22 at 19:20











  • It can be done with explode and split

    – Wen-Ben
    Apr 22 at 19:24











  • Also , When you read the text to pandas what is the format of the df ?

    – Wen-Ben
    Apr 22 at 19:25












  • The data is in text format.

    – Mary
    Apr 22 at 19:26

















12















I have a text file with the following format:



1: frack 0.733, shale 0.700, 
10: space 0.645, station 0.327, nasa 0.258,
4: celebr 0.262, bahar 0.345


I need to covert this text to a DataFrame with the following format:



Id Term weight
1 frack 0.733
1 shale 0.700
10 space 0.645
10 station 0.327
10 nasa 0.258
4 celebr 0.262
4 bahar 0.345


How I can do it?










share|improve this question
























  • I can only think of regex helping here.

    – amanb
    Apr 22 at 19:13







  • 1





    Depending on how large/long your file is, you can loop through the file without pandas to format it properly first.

    – Quang Hoang
    Apr 22 at 19:20











  • It can be done with explode and split

    – Wen-Ben
    Apr 22 at 19:24











  • Also , When you read the text to pandas what is the format of the df ?

    – Wen-Ben
    Apr 22 at 19:25












  • The data is in text format.

    – Mary
    Apr 22 at 19:26













12












12








12


6






I have a text file with the following format:



1: frack 0.733, shale 0.700, 
10: space 0.645, station 0.327, nasa 0.258,
4: celebr 0.262, bahar 0.345


I need to covert this text to a DataFrame with the following format:



Id Term weight
1 frack 0.733
1 shale 0.700
10 space 0.645
10 station 0.327
10 nasa 0.258
4 celebr 0.262
4 bahar 0.345


How I can do it?










share|improve this question
















I have a text file with the following format:



1: frack 0.733, shale 0.700, 
10: space 0.645, station 0.327, nasa 0.258,
4: celebr 0.262, bahar 0.345


I need to covert this text to a DataFrame with the following format:



Id Term weight
1 frack 0.733
1 shale 0.700
10 space 0.645
10 station 0.327
10 nasa 0.258
4 celebr 0.262
4 bahar 0.345


How I can do it?







python pandas






share|improve this question















share|improve this question













share|improve this question




share|improve this question








edited Apr 22 at 21:39









Brad Solomon

15k84096




15k84096










asked Apr 22 at 19:10









MaryMary

477217




477217












  • I can only think of regex helping here.

    – amanb
    Apr 22 at 19:13







  • 1





    Depending on how large/long your file is, you can loop through the file without pandas to format it properly first.

    – Quang Hoang
    Apr 22 at 19:20











  • It can be done with explode and split

    – Wen-Ben
    Apr 22 at 19:24











  • Also , When you read the text to pandas what is the format of the df ?

    – Wen-Ben
    Apr 22 at 19:25












  • The data is in text format.

    – Mary
    Apr 22 at 19:26

















  • I can only think of regex helping here.

    – amanb
    Apr 22 at 19:13







  • 1





    Depending on how large/long your file is, you can loop through the file without pandas to format it properly first.

    – Quang Hoang
    Apr 22 at 19:20











  • It can be done with explode and split

    – Wen-Ben
    Apr 22 at 19:24











  • Also , When you read the text to pandas what is the format of the df ?

    – Wen-Ben
    Apr 22 at 19:25












  • The data is in text format.

    – Mary
    Apr 22 at 19:26
















I can only think of regex helping here.

– amanb
Apr 22 at 19:13






I can only think of regex helping here.

– amanb
Apr 22 at 19:13





1




1





Depending on how large/long your file is, you can loop through the file without pandas to format it properly first.

– Quang Hoang
Apr 22 at 19:20





Depending on how large/long your file is, you can loop through the file without pandas to format it properly first.

– Quang Hoang
Apr 22 at 19:20













It can be done with explode and split

– Wen-Ben
Apr 22 at 19:24





It can be done with explode and split

– Wen-Ben
Apr 22 at 19:24













Also , When you read the text to pandas what is the format of the df ?

– Wen-Ben
Apr 22 at 19:25






Also , When you read the text to pandas what is the format of the df ?

– Wen-Ben
Apr 22 at 19:25














The data is in text format.

– Mary
Apr 22 at 19:26





The data is in text format.

– Mary
Apr 22 at 19:26












8 Answers
8






active

oldest

votes


















11














Here's an optimized way to parse the file with re, first taking the ID and then parsing the data tuples. This takes advantage of the fact that file objects are iterable. When you iterate over an open file, you get the individual lines as strings, from which you can extract the meaningful data elements.



import re
import pandas as pd

SEP_RE = re.compile(r":s+")
DATA_RE = re.compile(r"(?P<term>[a-z]+)s+(?P<weight>d+.d+)", re.I)


def parse(filepath: str):
def _parse(filepath):
with open(filepath) as f:
for line in f:
id, rest = SEP_RE.split(line, maxsplit=1)
for match in DATA_RE.finditer(rest):
yield [int(id), match["term"], float(match["weight"])]
return list(_parse(filepath))


Example:



>>> df = pd.DataFrame(parse("/Users/bradsolomon/Downloads/doc.txt"),
... columns=["Id", "Term", "weight"])
>>>
>>> df
Id Term weight
0 1 frack 0.733
1 1 shale 0.700
2 10 space 0.645
3 10 station 0.327
4 10 nasa 0.258
5 4 celebr 0.262
6 4 bahar 0.345

>>> df.dtypes
Id int64
Term object
weight float64
dtype: object



Walkthrough



SEP_RE looks for an initial separator: a literal : followed by one or more spaces. It uses maxsplit=1 to stop once the first split is found. Granted, this assumes your data is strictly formatted: that the format of your entire dataset consistently follows the example format laid out in your question.



After that, DATA_RE.finditer() deals with each (term, weight) pair extraxted from rest. The string rest itself will look like frack 0.733, shale 0.700,. .finditer() gives you multiple match objects, where you can use ["key"] notation to access the element from a given named capture group, such as (?P<term>[a-z]+).



An easy way to visualize this is to use an example line from your file as a string:



>>> line = "1: frack 0.733, shale 0.700,n"
>>> SEP_RE.split(line, maxsplit=1)
['1', 'frack 0.733, shale 0.700,n']


Now you have the initial ID and rest of the components, which you can unpack into two identifiers.



>>> id, rest = SEP_RE.split(line, maxsplit=1)
>>> it = DATA_RE.finditer(rest)
>>> match = next(it)
>>> match
<re.Match object; span=(0, 11), match='frack 0.733'>
>>> match["term"]
'frack'
>>> match["weight"]
'0.733'


The better way to visualize it is with pdb. Give it a try if you dare ;)



Disclaimer



This is one of those questions that demands a particular type of solution that may not generalize well if you ease up restrictions on your data format.



For instance, it assumes that each each Term can only take upper or lowercase ASCII letters, nothing else. If you have other Unicode characters as identifiers, you would want to look into other re characters such as w.






share|improve this answer




















  • 3





    Brilliant answer, I must say.

    – amanb
    Apr 22 at 19:42











  • @amanb Thank you!

    – Brad Solomon
    Apr 22 at 19:45


















3














You can use the DataFrame constructor if you massage your input to the appropriate format. Here is one way:



import pandas as pd
from itertools import chain

text="""1: frack 0.733, shale 0.700,
10: space 0.645, station 0.327, nasa 0.258,
4: celebr 0.262, bahar 0.345 """

df = pd.DataFrame(
list(
chain.from_iterable(
map(lambda z: (y[0], *z.strip().split()), y[1].split(",")) for y in
map(lambda x: x.strip(" ,").split(":"), text.splitlines())
)
),
columns=["Id", "Term", "weight"]
)

print(df)
# Id Term weight
#0 4 frack 0.733
#1 4 shale 0.700
#2 4 space 0.645
#3 4 station 0.327
#4 4 nasa 0.258
#5 4 celebr 0.262
#6 4 bahar 0.345


Explanation



I assume that you've read your file into the string text. The first thing you want to do is strip leading/trailing commas and whitespace before splitting on :



print(list(map(lambda x: x.strip(" ,").split(":"), text.splitlines())))
#[['1', ' frack 0.733, shale 0.700'],
# ['10', ' space 0.645, station 0.327, nasa 0.258'],
# ['4', ' celebr 0.262, bahar 0.345']]


The next step is to split on the comma to separate the values, and assign the Id to each set of values:



print(
[
list(map(lambda z: (y[0], *z.strip().split()), y[1].split(","))) for y in
map(lambda x: x.strip(" ,").split(":"), text.splitlines())
]
)
#[[('1', 'frack', '0.733'), ('1', 'shale', '0.700')],
# [('10', 'space', '0.645'),
# ('10', 'station', '0.327'),
# ('10', 'nasa', '0.258')],
# [('4', 'celebr', '0.262'), ('4', 'bahar', '0.345')]]


Finally, we use itertools.chain.from_iterable to flatten this output, which can then be passed straight to the DataFrame constructor.



Note: The * tuple unpacking is a python 3 feature.






share|improve this answer
































    3














    Assuming your data (csv file) looks like given:



    df = pd.read_csv('untitled.txt', sep=': ', header=None)
    df.set_index(0, inplace=True)

    # split the `,`
    df = df[1].str.strip().str.split(',', expand=True)

    # 0 1 2 3
    #-- ------------ ------------- ---------- ---
    # 1 frack 0.733 shale 0.700
    #10 space 0.645 station 0.327 nasa 0.258
    # 4 celebr 0.262 bahar 0.345

    # stack and drop empty
    df = df.stack()
    df = df[~df.eq('')]

    # split ' '
    df = df.str.strip().str.split(' ', expand=True)

    # edit to give final expected output:

    # rename index and columns for reset_index
    df.index.names = ['Id', 'to_drop']
    df.columns = ['Term', 'weight']

    # final df
    final_df = df.reset_index().drop('to_drop', axis=1)





    share|improve this answer

























    • how do you not getting error by ''' sep=': ' ''' which is 2 character separator?

      – Rebin
      Apr 22 at 19:55






    • 1





      @Rebin add engine='python'

      – pault
      Apr 22 at 19:58











    • @pault weird, 'cause I already split by ' '. It yields correct data on my computer.

      – Quang Hoang
      Apr 22 at 20:02











    • I dont know how to add engine python? what is the command?

      – Rebin
      Apr 22 at 20:02






    • 1





      @Rebin add it as a param to pd.read_csv - df = pd.read_csv(..., engine='python')

      – pault
      Apr 22 at 20:04


















    2














    Just to put my two cents in: you could write yourself a parser and feed the result into pandas:



    import pandas as pd
    from parsimonious.grammar import Grammar
    from parsimonious.nodes import NodeVisitor

    file = """
    1: frack 0.733, shale 0.700,
    10: space 0.645, station 0.327, nasa 0.258,
    4: celebr 0.262, bahar 0.345
    """

    grammar = Grammar(
    r"""
    expr = (garbage / line)+

    line = id colon pair*
    pair = term ws weight sep? ws?
    garbage = ws+

    id = ~"d+"
    colon = ws? ":" ws?
    sep = ws? "," ws?

    term = ~"[a-zA-Z]+"
    weight = ~"d+(?:.d+)?"

    ws = ~"s+"
    """
    )

    tree = grammar.parse(file)

    class PandasVisitor(NodeVisitor):
    def generic_visit(self, node, visited_children):
    return visited_children or node

    def visit_pair(self, node, visited_children):
    term, _, weight, *_ = visited_children
    return (term.text, weight.text)

    def visit_line(self, node, visited_children):
    id, _, pairs = visited_children
    return [(id.text, *pair) for pair in pairs]

    def visit_garbage(self, node, visited_children):
    return None

    def visit_expr(self, node, visited_children):
    return [item
    for lst in visited_children
    for sublst in lst if sublst
    for item in sublst]

    pv = PandasVisitor()
    out = pv.visit(tree)

    df = pd.DataFrame(out, columns=["Id", "Term", "weight"])
    print(df)


    This yields



     Id Term weight
    0 1 frack 0.733
    1 1 shale 0.700
    2 10 space 0.645
    3 10 station 0.327
    4 10 nasa 0.258
    5 4 celebr 0.262
    6 4 bahar 0.345


    Here, we are building a grammar with the possible information: either a line or whitespace. The line is built of an id (e.g. 1), followed a colon (:), whitespace and pairs of term and weight evtl. followed by a separator.



    Afterwards, we need a NodeVisitor class to actually do sth. with the retrieved ast.






    share|improve this answer
































      0














      Here is another take for your question. Creating a list which will contain lists for every id and term. And then produce the dataframe.



      import pandas as pd
      file=r"give_your_path".replace('\', '/')
      my_list_of_lists=[]#creating an empty list which will contain lists of [Id Term Weight]
      with open(file,"r+") as f:
      for line in f.readlines():#looping every line
      my_id=[line.split(":")[0]]#storing the Id in order to use it in every term
      for term in [s.strip().split(" ") for s in line[line.find(":")+1:].split(",")[:-1]]:
      my_list_of_lists.append(my_id+term)
      df=pd.DataFrame.from_records(my_list_of_lists)#turning the lists to dataframe
      df.columns=["Id","Term","weight"]#giving columns their names





      share|improve this answer






























        0














        It is possible to just use entirely pandas:



        df = pd.read_csv(StringIO(u"""1: frack 0.733, shale 0.700, 
        10: space 0.645, station 0.327, nasa 0.258,
        4: celebr 0.262, bahar 0.345 """), sep=":", header=None)

        #df:
        0 1
        0 1 frack 0.733, shale 0.700,
        1 10 space 0.645, station 0.327, nasa 0.258,
        2 4 celebr 0.262, bahar 0.345


        Turn the column 1 into a list and then expand:



        df[1] = df[1].str.split(",", expand=False)

        dfs = []
        for idx, rows in df.iterrows():
        print(rows)
        dfslice = pd.DataFrame("Id": [rows[0]]*len(rows[1]), "terms": rows[1])
        dfs.append(dfslice)
        newdf = pd.concat(dfs, ignore_index=True)

        # this creates newdf:
        Id terms
        0 1 frack 0.733
        1 1 shale 0.700
        2 1
        3 10 space 0.645
        4 10 station 0.327
        5 10 nasa 0.258
        6 10
        7 4 celebr 0.262
        8 4 bahar 0.345


        Now we need to str split the last line and drop empties:



        newdf["terms"] = newdf["terms"].str.strip()
        newdf = newdf.join(newdf["terms"].str.split(" ", expand=True))
        newdf.columns = ["Id", "terms", "Term", "Weights"]
        newdf = newdf.drop("terms", axis=1).dropna()


        Resulting newdf:



         Id Term Weights
        0 1 frack 0.733
        1 1 shale 0.700
        3 10 space 0.645
        4 10 station 0.327
        5 10 nasa 0.258
        7 4 celebr 0.262
        8 4 bahar 0.345





        share|improve this answer






























          0














          Could I assume that there is just 1 space before 'TERM'?



          df=pd.DataFrame(columns=['ID','Term','Weight'])
          with open('C:/random/d1','r') as readObject:
          for line in readObject:
          line=line.rstrip('n')
          tempList1=line.split(':')
          tempList2=tempList1[1]
          tempList2=tempList2.rstrip(',')
          tempList2=tempList2.split(',')
          for item in tempList2:
          e=item.split(' ')
          tempRow=[tempList1[0], e[0],e[1]]
          df.loc[len(df)]=tempRow
          print(df)





          share|improve this answer






























            -3














            1) You can read row by row.



            2) Then you can separate by ':' for your index and ',' for the values



            1)



            with open('path/filename.txt','r') as filename:
            content = filename.readlines()


            2)
            content = [x.split(':') for x in content]



            This will give you the following result:



            content =[
            ['1','frack 0.733, shale 0.700,'],
            ['10', 'space 0.645, station 0.327, nasa 0.258,'],
            ['4','celebr 0.262, bahar 0.345 ']]





            share|improve this answer


















            • 3





              Your result is not the result asked for in the question.

              – GiraffeMan91
              Apr 22 at 19:31











            Your Answer






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            8 Answers
            8






            active

            oldest

            votes








            8 Answers
            8






            active

            oldest

            votes









            active

            oldest

            votes






            active

            oldest

            votes









            11














            Here's an optimized way to parse the file with re, first taking the ID and then parsing the data tuples. This takes advantage of the fact that file objects are iterable. When you iterate over an open file, you get the individual lines as strings, from which you can extract the meaningful data elements.



            import re
            import pandas as pd

            SEP_RE = re.compile(r":s+")
            DATA_RE = re.compile(r"(?P<term>[a-z]+)s+(?P<weight>d+.d+)", re.I)


            def parse(filepath: str):
            def _parse(filepath):
            with open(filepath) as f:
            for line in f:
            id, rest = SEP_RE.split(line, maxsplit=1)
            for match in DATA_RE.finditer(rest):
            yield [int(id), match["term"], float(match["weight"])]
            return list(_parse(filepath))


            Example:



            >>> df = pd.DataFrame(parse("/Users/bradsolomon/Downloads/doc.txt"),
            ... columns=["Id", "Term", "weight"])
            >>>
            >>> df
            Id Term weight
            0 1 frack 0.733
            1 1 shale 0.700
            2 10 space 0.645
            3 10 station 0.327
            4 10 nasa 0.258
            5 4 celebr 0.262
            6 4 bahar 0.345

            >>> df.dtypes
            Id int64
            Term object
            weight float64
            dtype: object



            Walkthrough



            SEP_RE looks for an initial separator: a literal : followed by one or more spaces. It uses maxsplit=1 to stop once the first split is found. Granted, this assumes your data is strictly formatted: that the format of your entire dataset consistently follows the example format laid out in your question.



            After that, DATA_RE.finditer() deals with each (term, weight) pair extraxted from rest. The string rest itself will look like frack 0.733, shale 0.700,. .finditer() gives you multiple match objects, where you can use ["key"] notation to access the element from a given named capture group, such as (?P<term>[a-z]+).



            An easy way to visualize this is to use an example line from your file as a string:



            >>> line = "1: frack 0.733, shale 0.700,n"
            >>> SEP_RE.split(line, maxsplit=1)
            ['1', 'frack 0.733, shale 0.700,n']


            Now you have the initial ID and rest of the components, which you can unpack into two identifiers.



            >>> id, rest = SEP_RE.split(line, maxsplit=1)
            >>> it = DATA_RE.finditer(rest)
            >>> match = next(it)
            >>> match
            <re.Match object; span=(0, 11), match='frack 0.733'>
            >>> match["term"]
            'frack'
            >>> match["weight"]
            '0.733'


            The better way to visualize it is with pdb. Give it a try if you dare ;)



            Disclaimer



            This is one of those questions that demands a particular type of solution that may not generalize well if you ease up restrictions on your data format.



            For instance, it assumes that each each Term can only take upper or lowercase ASCII letters, nothing else. If you have other Unicode characters as identifiers, you would want to look into other re characters such as w.






            share|improve this answer




















            • 3





              Brilliant answer, I must say.

              – amanb
              Apr 22 at 19:42











            • @amanb Thank you!

              – Brad Solomon
              Apr 22 at 19:45















            11














            Here's an optimized way to parse the file with re, first taking the ID and then parsing the data tuples. This takes advantage of the fact that file objects are iterable. When you iterate over an open file, you get the individual lines as strings, from which you can extract the meaningful data elements.



            import re
            import pandas as pd

            SEP_RE = re.compile(r":s+")
            DATA_RE = re.compile(r"(?P<term>[a-z]+)s+(?P<weight>d+.d+)", re.I)


            def parse(filepath: str):
            def _parse(filepath):
            with open(filepath) as f:
            for line in f:
            id, rest = SEP_RE.split(line, maxsplit=1)
            for match in DATA_RE.finditer(rest):
            yield [int(id), match["term"], float(match["weight"])]
            return list(_parse(filepath))


            Example:



            >>> df = pd.DataFrame(parse("/Users/bradsolomon/Downloads/doc.txt"),
            ... columns=["Id", "Term", "weight"])
            >>>
            >>> df
            Id Term weight
            0 1 frack 0.733
            1 1 shale 0.700
            2 10 space 0.645
            3 10 station 0.327
            4 10 nasa 0.258
            5 4 celebr 0.262
            6 4 bahar 0.345

            >>> df.dtypes
            Id int64
            Term object
            weight float64
            dtype: object



            Walkthrough



            SEP_RE looks for an initial separator: a literal : followed by one or more spaces. It uses maxsplit=1 to stop once the first split is found. Granted, this assumes your data is strictly formatted: that the format of your entire dataset consistently follows the example format laid out in your question.



            After that, DATA_RE.finditer() deals with each (term, weight) pair extraxted from rest. The string rest itself will look like frack 0.733, shale 0.700,. .finditer() gives you multiple match objects, where you can use ["key"] notation to access the element from a given named capture group, such as (?P<term>[a-z]+).



            An easy way to visualize this is to use an example line from your file as a string:



            >>> line = "1: frack 0.733, shale 0.700,n"
            >>> SEP_RE.split(line, maxsplit=1)
            ['1', 'frack 0.733, shale 0.700,n']


            Now you have the initial ID and rest of the components, which you can unpack into two identifiers.



            >>> id, rest = SEP_RE.split(line, maxsplit=1)
            >>> it = DATA_RE.finditer(rest)
            >>> match = next(it)
            >>> match
            <re.Match object; span=(0, 11), match='frack 0.733'>
            >>> match["term"]
            'frack'
            >>> match["weight"]
            '0.733'


            The better way to visualize it is with pdb. Give it a try if you dare ;)



            Disclaimer



            This is one of those questions that demands a particular type of solution that may not generalize well if you ease up restrictions on your data format.



            For instance, it assumes that each each Term can only take upper or lowercase ASCII letters, nothing else. If you have other Unicode characters as identifiers, you would want to look into other re characters such as w.






            share|improve this answer




















            • 3





              Brilliant answer, I must say.

              – amanb
              Apr 22 at 19:42











            • @amanb Thank you!

              – Brad Solomon
              Apr 22 at 19:45













            11












            11








            11







            Here's an optimized way to parse the file with re, first taking the ID and then parsing the data tuples. This takes advantage of the fact that file objects are iterable. When you iterate over an open file, you get the individual lines as strings, from which you can extract the meaningful data elements.



            import re
            import pandas as pd

            SEP_RE = re.compile(r":s+")
            DATA_RE = re.compile(r"(?P<term>[a-z]+)s+(?P<weight>d+.d+)", re.I)


            def parse(filepath: str):
            def _parse(filepath):
            with open(filepath) as f:
            for line in f:
            id, rest = SEP_RE.split(line, maxsplit=1)
            for match in DATA_RE.finditer(rest):
            yield [int(id), match["term"], float(match["weight"])]
            return list(_parse(filepath))


            Example:



            >>> df = pd.DataFrame(parse("/Users/bradsolomon/Downloads/doc.txt"),
            ... columns=["Id", "Term", "weight"])
            >>>
            >>> df
            Id Term weight
            0 1 frack 0.733
            1 1 shale 0.700
            2 10 space 0.645
            3 10 station 0.327
            4 10 nasa 0.258
            5 4 celebr 0.262
            6 4 bahar 0.345

            >>> df.dtypes
            Id int64
            Term object
            weight float64
            dtype: object



            Walkthrough



            SEP_RE looks for an initial separator: a literal : followed by one or more spaces. It uses maxsplit=1 to stop once the first split is found. Granted, this assumes your data is strictly formatted: that the format of your entire dataset consistently follows the example format laid out in your question.



            After that, DATA_RE.finditer() deals with each (term, weight) pair extraxted from rest. The string rest itself will look like frack 0.733, shale 0.700,. .finditer() gives you multiple match objects, where you can use ["key"] notation to access the element from a given named capture group, such as (?P<term>[a-z]+).



            An easy way to visualize this is to use an example line from your file as a string:



            >>> line = "1: frack 0.733, shale 0.700,n"
            >>> SEP_RE.split(line, maxsplit=1)
            ['1', 'frack 0.733, shale 0.700,n']


            Now you have the initial ID and rest of the components, which you can unpack into two identifiers.



            >>> id, rest = SEP_RE.split(line, maxsplit=1)
            >>> it = DATA_RE.finditer(rest)
            >>> match = next(it)
            >>> match
            <re.Match object; span=(0, 11), match='frack 0.733'>
            >>> match["term"]
            'frack'
            >>> match["weight"]
            '0.733'


            The better way to visualize it is with pdb. Give it a try if you dare ;)



            Disclaimer



            This is one of those questions that demands a particular type of solution that may not generalize well if you ease up restrictions on your data format.



            For instance, it assumes that each each Term can only take upper or lowercase ASCII letters, nothing else. If you have other Unicode characters as identifiers, you would want to look into other re characters such as w.






            share|improve this answer















            Here's an optimized way to parse the file with re, first taking the ID and then parsing the data tuples. This takes advantage of the fact that file objects are iterable. When you iterate over an open file, you get the individual lines as strings, from which you can extract the meaningful data elements.



            import re
            import pandas as pd

            SEP_RE = re.compile(r":s+")
            DATA_RE = re.compile(r"(?P<term>[a-z]+)s+(?P<weight>d+.d+)", re.I)


            def parse(filepath: str):
            def _parse(filepath):
            with open(filepath) as f:
            for line in f:
            id, rest = SEP_RE.split(line, maxsplit=1)
            for match in DATA_RE.finditer(rest):
            yield [int(id), match["term"], float(match["weight"])]
            return list(_parse(filepath))


            Example:



            >>> df = pd.DataFrame(parse("/Users/bradsolomon/Downloads/doc.txt"),
            ... columns=["Id", "Term", "weight"])
            >>>
            >>> df
            Id Term weight
            0 1 frack 0.733
            1 1 shale 0.700
            2 10 space 0.645
            3 10 station 0.327
            4 10 nasa 0.258
            5 4 celebr 0.262
            6 4 bahar 0.345

            >>> df.dtypes
            Id int64
            Term object
            weight float64
            dtype: object



            Walkthrough



            SEP_RE looks for an initial separator: a literal : followed by one or more spaces. It uses maxsplit=1 to stop once the first split is found. Granted, this assumes your data is strictly formatted: that the format of your entire dataset consistently follows the example format laid out in your question.



            After that, DATA_RE.finditer() deals with each (term, weight) pair extraxted from rest. The string rest itself will look like frack 0.733, shale 0.700,. .finditer() gives you multiple match objects, where you can use ["key"] notation to access the element from a given named capture group, such as (?P<term>[a-z]+).



            An easy way to visualize this is to use an example line from your file as a string:



            >>> line = "1: frack 0.733, shale 0.700,n"
            >>> SEP_RE.split(line, maxsplit=1)
            ['1', 'frack 0.733, shale 0.700,n']


            Now you have the initial ID and rest of the components, which you can unpack into two identifiers.



            >>> id, rest = SEP_RE.split(line, maxsplit=1)
            >>> it = DATA_RE.finditer(rest)
            >>> match = next(it)
            >>> match
            <re.Match object; span=(0, 11), match='frack 0.733'>
            >>> match["term"]
            'frack'
            >>> match["weight"]
            '0.733'


            The better way to visualize it is with pdb. Give it a try if you dare ;)



            Disclaimer



            This is one of those questions that demands a particular type of solution that may not generalize well if you ease up restrictions on your data format.



            For instance, it assumes that each each Term can only take upper or lowercase ASCII letters, nothing else. If you have other Unicode characters as identifiers, you would want to look into other re characters such as w.







            share|improve this answer














            share|improve this answer



            share|improve this answer








            edited Apr 23 at 2:00

























            answered Apr 22 at 19:35









            Brad SolomonBrad Solomon

            15k84096




            15k84096







            • 3





              Brilliant answer, I must say.

              – amanb
              Apr 22 at 19:42











            • @amanb Thank you!

              – Brad Solomon
              Apr 22 at 19:45












            • 3





              Brilliant answer, I must say.

              – amanb
              Apr 22 at 19:42











            • @amanb Thank you!

              – Brad Solomon
              Apr 22 at 19:45







            3




            3





            Brilliant answer, I must say.

            – amanb
            Apr 22 at 19:42





            Brilliant answer, I must say.

            – amanb
            Apr 22 at 19:42













            @amanb Thank you!

            – Brad Solomon
            Apr 22 at 19:45





            @amanb Thank you!

            – Brad Solomon
            Apr 22 at 19:45













            3














            You can use the DataFrame constructor if you massage your input to the appropriate format. Here is one way:



            import pandas as pd
            from itertools import chain

            text="""1: frack 0.733, shale 0.700,
            10: space 0.645, station 0.327, nasa 0.258,
            4: celebr 0.262, bahar 0.345 """

            df = pd.DataFrame(
            list(
            chain.from_iterable(
            map(lambda z: (y[0], *z.strip().split()), y[1].split(",")) for y in
            map(lambda x: x.strip(" ,").split(":"), text.splitlines())
            )
            ),
            columns=["Id", "Term", "weight"]
            )

            print(df)
            # Id Term weight
            #0 4 frack 0.733
            #1 4 shale 0.700
            #2 4 space 0.645
            #3 4 station 0.327
            #4 4 nasa 0.258
            #5 4 celebr 0.262
            #6 4 bahar 0.345


            Explanation



            I assume that you've read your file into the string text. The first thing you want to do is strip leading/trailing commas and whitespace before splitting on :



            print(list(map(lambda x: x.strip(" ,").split(":"), text.splitlines())))
            #[['1', ' frack 0.733, shale 0.700'],
            # ['10', ' space 0.645, station 0.327, nasa 0.258'],
            # ['4', ' celebr 0.262, bahar 0.345']]


            The next step is to split on the comma to separate the values, and assign the Id to each set of values:



            print(
            [
            list(map(lambda z: (y[0], *z.strip().split()), y[1].split(","))) for y in
            map(lambda x: x.strip(" ,").split(":"), text.splitlines())
            ]
            )
            #[[('1', 'frack', '0.733'), ('1', 'shale', '0.700')],
            # [('10', 'space', '0.645'),
            # ('10', 'station', '0.327'),
            # ('10', 'nasa', '0.258')],
            # [('4', 'celebr', '0.262'), ('4', 'bahar', '0.345')]]


            Finally, we use itertools.chain.from_iterable to flatten this output, which can then be passed straight to the DataFrame constructor.



            Note: The * tuple unpacking is a python 3 feature.






            share|improve this answer





























              3














              You can use the DataFrame constructor if you massage your input to the appropriate format. Here is one way:



              import pandas as pd
              from itertools import chain

              text="""1: frack 0.733, shale 0.700,
              10: space 0.645, station 0.327, nasa 0.258,
              4: celebr 0.262, bahar 0.345 """

              df = pd.DataFrame(
              list(
              chain.from_iterable(
              map(lambda z: (y[0], *z.strip().split()), y[1].split(",")) for y in
              map(lambda x: x.strip(" ,").split(":"), text.splitlines())
              )
              ),
              columns=["Id", "Term", "weight"]
              )

              print(df)
              # Id Term weight
              #0 4 frack 0.733
              #1 4 shale 0.700
              #2 4 space 0.645
              #3 4 station 0.327
              #4 4 nasa 0.258
              #5 4 celebr 0.262
              #6 4 bahar 0.345


              Explanation



              I assume that you've read your file into the string text. The first thing you want to do is strip leading/trailing commas and whitespace before splitting on :



              print(list(map(lambda x: x.strip(" ,").split(":"), text.splitlines())))
              #[['1', ' frack 0.733, shale 0.700'],
              # ['10', ' space 0.645, station 0.327, nasa 0.258'],
              # ['4', ' celebr 0.262, bahar 0.345']]


              The next step is to split on the comma to separate the values, and assign the Id to each set of values:



              print(
              [
              list(map(lambda z: (y[0], *z.strip().split()), y[1].split(","))) for y in
              map(lambda x: x.strip(" ,").split(":"), text.splitlines())
              ]
              )
              #[[('1', 'frack', '0.733'), ('1', 'shale', '0.700')],
              # [('10', 'space', '0.645'),
              # ('10', 'station', '0.327'),
              # ('10', 'nasa', '0.258')],
              # [('4', 'celebr', '0.262'), ('4', 'bahar', '0.345')]]


              Finally, we use itertools.chain.from_iterable to flatten this output, which can then be passed straight to the DataFrame constructor.



              Note: The * tuple unpacking is a python 3 feature.






              share|improve this answer



























                3












                3








                3







                You can use the DataFrame constructor if you massage your input to the appropriate format. Here is one way:



                import pandas as pd
                from itertools import chain

                text="""1: frack 0.733, shale 0.700,
                10: space 0.645, station 0.327, nasa 0.258,
                4: celebr 0.262, bahar 0.345 """

                df = pd.DataFrame(
                list(
                chain.from_iterable(
                map(lambda z: (y[0], *z.strip().split()), y[1].split(",")) for y in
                map(lambda x: x.strip(" ,").split(":"), text.splitlines())
                )
                ),
                columns=["Id", "Term", "weight"]
                )

                print(df)
                # Id Term weight
                #0 4 frack 0.733
                #1 4 shale 0.700
                #2 4 space 0.645
                #3 4 station 0.327
                #4 4 nasa 0.258
                #5 4 celebr 0.262
                #6 4 bahar 0.345


                Explanation



                I assume that you've read your file into the string text. The first thing you want to do is strip leading/trailing commas and whitespace before splitting on :



                print(list(map(lambda x: x.strip(" ,").split(":"), text.splitlines())))
                #[['1', ' frack 0.733, shale 0.700'],
                # ['10', ' space 0.645, station 0.327, nasa 0.258'],
                # ['4', ' celebr 0.262, bahar 0.345']]


                The next step is to split on the comma to separate the values, and assign the Id to each set of values:



                print(
                [
                list(map(lambda z: (y[0], *z.strip().split()), y[1].split(","))) for y in
                map(lambda x: x.strip(" ,").split(":"), text.splitlines())
                ]
                )
                #[[('1', 'frack', '0.733'), ('1', 'shale', '0.700')],
                # [('10', 'space', '0.645'),
                # ('10', 'station', '0.327'),
                # ('10', 'nasa', '0.258')],
                # [('4', 'celebr', '0.262'), ('4', 'bahar', '0.345')]]


                Finally, we use itertools.chain.from_iterable to flatten this output, which can then be passed straight to the DataFrame constructor.



                Note: The * tuple unpacking is a python 3 feature.






                share|improve this answer















                You can use the DataFrame constructor if you massage your input to the appropriate format. Here is one way:



                import pandas as pd
                from itertools import chain

                text="""1: frack 0.733, shale 0.700,
                10: space 0.645, station 0.327, nasa 0.258,
                4: celebr 0.262, bahar 0.345 """

                df = pd.DataFrame(
                list(
                chain.from_iterable(
                map(lambda z: (y[0], *z.strip().split()), y[1].split(",")) for y in
                map(lambda x: x.strip(" ,").split(":"), text.splitlines())
                )
                ),
                columns=["Id", "Term", "weight"]
                )

                print(df)
                # Id Term weight
                #0 4 frack 0.733
                #1 4 shale 0.700
                #2 4 space 0.645
                #3 4 station 0.327
                #4 4 nasa 0.258
                #5 4 celebr 0.262
                #6 4 bahar 0.345


                Explanation



                I assume that you've read your file into the string text. The first thing you want to do is strip leading/trailing commas and whitespace before splitting on :



                print(list(map(lambda x: x.strip(" ,").split(":"), text.splitlines())))
                #[['1', ' frack 0.733, shale 0.700'],
                # ['10', ' space 0.645, station 0.327, nasa 0.258'],
                # ['4', ' celebr 0.262, bahar 0.345']]


                The next step is to split on the comma to separate the values, and assign the Id to each set of values:



                print(
                [
                list(map(lambda z: (y[0], *z.strip().split()), y[1].split(","))) for y in
                map(lambda x: x.strip(" ,").split(":"), text.splitlines())
                ]
                )
                #[[('1', 'frack', '0.733'), ('1', 'shale', '0.700')],
                # [('10', 'space', '0.645'),
                # ('10', 'station', '0.327'),
                # ('10', 'nasa', '0.258')],
                # [('4', 'celebr', '0.262'), ('4', 'bahar', '0.345')]]


                Finally, we use itertools.chain.from_iterable to flatten this output, which can then be passed straight to the DataFrame constructor.



                Note: The * tuple unpacking is a python 3 feature.







                share|improve this answer














                share|improve this answer



                share|improve this answer








                edited Apr 22 at 19:44

























                answered Apr 22 at 19:39









                paultpault

                17.4k42854




                17.4k42854





















                    3














                    Assuming your data (csv file) looks like given:



                    df = pd.read_csv('untitled.txt', sep=': ', header=None)
                    df.set_index(0, inplace=True)

                    # split the `,`
                    df = df[1].str.strip().str.split(',', expand=True)

                    # 0 1 2 3
                    #-- ------------ ------------- ---------- ---
                    # 1 frack 0.733 shale 0.700
                    #10 space 0.645 station 0.327 nasa 0.258
                    # 4 celebr 0.262 bahar 0.345

                    # stack and drop empty
                    df = df.stack()
                    df = df[~df.eq('')]

                    # split ' '
                    df = df.str.strip().str.split(' ', expand=True)

                    # edit to give final expected output:

                    # rename index and columns for reset_index
                    df.index.names = ['Id', 'to_drop']
                    df.columns = ['Term', 'weight']

                    # final df
                    final_df = df.reset_index().drop('to_drop', axis=1)





                    share|improve this answer

























                    • how do you not getting error by ''' sep=': ' ''' which is 2 character separator?

                      – Rebin
                      Apr 22 at 19:55






                    • 1





                      @Rebin add engine='python'

                      – pault
                      Apr 22 at 19:58











                    • @pault weird, 'cause I already split by ' '. It yields correct data on my computer.

                      – Quang Hoang
                      Apr 22 at 20:02











                    • I dont know how to add engine python? what is the command?

                      – Rebin
                      Apr 22 at 20:02






                    • 1





                      @Rebin add it as a param to pd.read_csv - df = pd.read_csv(..., engine='python')

                      – pault
                      Apr 22 at 20:04















                    3














                    Assuming your data (csv file) looks like given:



                    df = pd.read_csv('untitled.txt', sep=': ', header=None)
                    df.set_index(0, inplace=True)

                    # split the `,`
                    df = df[1].str.strip().str.split(',', expand=True)

                    # 0 1 2 3
                    #-- ------------ ------------- ---------- ---
                    # 1 frack 0.733 shale 0.700
                    #10 space 0.645 station 0.327 nasa 0.258
                    # 4 celebr 0.262 bahar 0.345

                    # stack and drop empty
                    df = df.stack()
                    df = df[~df.eq('')]

                    # split ' '
                    df = df.str.strip().str.split(' ', expand=True)

                    # edit to give final expected output:

                    # rename index and columns for reset_index
                    df.index.names = ['Id', 'to_drop']
                    df.columns = ['Term', 'weight']

                    # final df
                    final_df = df.reset_index().drop('to_drop', axis=1)





                    share|improve this answer

























                    • how do you not getting error by ''' sep=': ' ''' which is 2 character separator?

                      – Rebin
                      Apr 22 at 19:55






                    • 1





                      @Rebin add engine='python'

                      – pault
                      Apr 22 at 19:58











                    • @pault weird, 'cause I already split by ' '. It yields correct data on my computer.

                      – Quang Hoang
                      Apr 22 at 20:02











                    • I dont know how to add engine python? what is the command?

                      – Rebin
                      Apr 22 at 20:02






                    • 1





                      @Rebin add it as a param to pd.read_csv - df = pd.read_csv(..., engine='python')

                      – pault
                      Apr 22 at 20:04













                    3












                    3








                    3







                    Assuming your data (csv file) looks like given:



                    df = pd.read_csv('untitled.txt', sep=': ', header=None)
                    df.set_index(0, inplace=True)

                    # split the `,`
                    df = df[1].str.strip().str.split(',', expand=True)

                    # 0 1 2 3
                    #-- ------------ ------------- ---------- ---
                    # 1 frack 0.733 shale 0.700
                    #10 space 0.645 station 0.327 nasa 0.258
                    # 4 celebr 0.262 bahar 0.345

                    # stack and drop empty
                    df = df.stack()
                    df = df[~df.eq('')]

                    # split ' '
                    df = df.str.strip().str.split(' ', expand=True)

                    # edit to give final expected output:

                    # rename index and columns for reset_index
                    df.index.names = ['Id', 'to_drop']
                    df.columns = ['Term', 'weight']

                    # final df
                    final_df = df.reset_index().drop('to_drop', axis=1)





                    share|improve this answer















                    Assuming your data (csv file) looks like given:



                    df = pd.read_csv('untitled.txt', sep=': ', header=None)
                    df.set_index(0, inplace=True)

                    # split the `,`
                    df = df[1].str.strip().str.split(',', expand=True)

                    # 0 1 2 3
                    #-- ------------ ------------- ---------- ---
                    # 1 frack 0.733 shale 0.700
                    #10 space 0.645 station 0.327 nasa 0.258
                    # 4 celebr 0.262 bahar 0.345

                    # stack and drop empty
                    df = df.stack()
                    df = df[~df.eq('')]

                    # split ' '
                    df = df.str.strip().str.split(' ', expand=True)

                    # edit to give final expected output:

                    # rename index and columns for reset_index
                    df.index.names = ['Id', 'to_drop']
                    df.columns = ['Term', 'weight']

                    # final df
                    final_df = df.reset_index().drop('to_drop', axis=1)






                    share|improve this answer














                    share|improve this answer



                    share|improve this answer








                    edited Apr 22 at 19:57

























                    answered Apr 22 at 19:43









                    Quang HoangQuang Hoang

                    4,03611020




                    4,03611020












                    • how do you not getting error by ''' sep=': ' ''' which is 2 character separator?

                      – Rebin
                      Apr 22 at 19:55






                    • 1





                      @Rebin add engine='python'

                      – pault
                      Apr 22 at 19:58











                    • @pault weird, 'cause I already split by ' '. It yields correct data on my computer.

                      – Quang Hoang
                      Apr 22 at 20:02











                    • I dont know how to add engine python? what is the command?

                      – Rebin
                      Apr 22 at 20:02






                    • 1





                      @Rebin add it as a param to pd.read_csv - df = pd.read_csv(..., engine='python')

                      – pault
                      Apr 22 at 20:04

















                    • how do you not getting error by ''' sep=': ' ''' which is 2 character separator?

                      – Rebin
                      Apr 22 at 19:55






                    • 1





                      @Rebin add engine='python'

                      – pault
                      Apr 22 at 19:58











                    • @pault weird, 'cause I already split by ' '. It yields correct data on my computer.

                      – Quang Hoang
                      Apr 22 at 20:02











                    • I dont know how to add engine python? what is the command?

                      – Rebin
                      Apr 22 at 20:02






                    • 1





                      @Rebin add it as a param to pd.read_csv - df = pd.read_csv(..., engine='python')

                      – pault
                      Apr 22 at 20:04
















                    how do you not getting error by ''' sep=': ' ''' which is 2 character separator?

                    – Rebin
                    Apr 22 at 19:55





                    how do you not getting error by ''' sep=': ' ''' which is 2 character separator?

                    – Rebin
                    Apr 22 at 19:55




                    1




                    1





                    @Rebin add engine='python'

                    – pault
                    Apr 22 at 19:58





                    @Rebin add engine='python'

                    – pault
                    Apr 22 at 19:58













                    @pault weird, 'cause I already split by ' '. It yields correct data on my computer.

                    – Quang Hoang
                    Apr 22 at 20:02





                    @pault weird, 'cause I already split by ' '. It yields correct data on my computer.

                    – Quang Hoang
                    Apr 22 at 20:02













                    I dont know how to add engine python? what is the command?

                    – Rebin
                    Apr 22 at 20:02





                    I dont know how to add engine python? what is the command?

                    – Rebin
                    Apr 22 at 20:02




                    1




                    1





                    @Rebin add it as a param to pd.read_csv - df = pd.read_csv(..., engine='python')

                    – pault
                    Apr 22 at 20:04





                    @Rebin add it as a param to pd.read_csv - df = pd.read_csv(..., engine='python')

                    – pault
                    Apr 22 at 20:04











                    2














                    Just to put my two cents in: you could write yourself a parser and feed the result into pandas:



                    import pandas as pd
                    from parsimonious.grammar import Grammar
                    from parsimonious.nodes import NodeVisitor

                    file = """
                    1: frack 0.733, shale 0.700,
                    10: space 0.645, station 0.327, nasa 0.258,
                    4: celebr 0.262, bahar 0.345
                    """

                    grammar = Grammar(
                    r"""
                    expr = (garbage / line)+

                    line = id colon pair*
                    pair = term ws weight sep? ws?
                    garbage = ws+

                    id = ~"d+"
                    colon = ws? ":" ws?
                    sep = ws? "," ws?

                    term = ~"[a-zA-Z]+"
                    weight = ~"d+(?:.d+)?"

                    ws = ~"s+"
                    """
                    )

                    tree = grammar.parse(file)

                    class PandasVisitor(NodeVisitor):
                    def generic_visit(self, node, visited_children):
                    return visited_children or node

                    def visit_pair(self, node, visited_children):
                    term, _, weight, *_ = visited_children
                    return (term.text, weight.text)

                    def visit_line(self, node, visited_children):
                    id, _, pairs = visited_children
                    return [(id.text, *pair) for pair in pairs]

                    def visit_garbage(self, node, visited_children):
                    return None

                    def visit_expr(self, node, visited_children):
                    return [item
                    for lst in visited_children
                    for sublst in lst if sublst
                    for item in sublst]

                    pv = PandasVisitor()
                    out = pv.visit(tree)

                    df = pd.DataFrame(out, columns=["Id", "Term", "weight"])
                    print(df)


                    This yields



                     Id Term weight
                    0 1 frack 0.733
                    1 1 shale 0.700
                    2 10 space 0.645
                    3 10 station 0.327
                    4 10 nasa 0.258
                    5 4 celebr 0.262
                    6 4 bahar 0.345


                    Here, we are building a grammar with the possible information: either a line or whitespace. The line is built of an id (e.g. 1), followed a colon (:), whitespace and pairs of term and weight evtl. followed by a separator.



                    Afterwards, we need a NodeVisitor class to actually do sth. with the retrieved ast.






                    share|improve this answer





























                      2














                      Just to put my two cents in: you could write yourself a parser and feed the result into pandas:



                      import pandas as pd
                      from parsimonious.grammar import Grammar
                      from parsimonious.nodes import NodeVisitor

                      file = """
                      1: frack 0.733, shale 0.700,
                      10: space 0.645, station 0.327, nasa 0.258,
                      4: celebr 0.262, bahar 0.345
                      """

                      grammar = Grammar(
                      r"""
                      expr = (garbage / line)+

                      line = id colon pair*
                      pair = term ws weight sep? ws?
                      garbage = ws+

                      id = ~"d+"
                      colon = ws? ":" ws?
                      sep = ws? "," ws?

                      term = ~"[a-zA-Z]+"
                      weight = ~"d+(?:.d+)?"

                      ws = ~"s+"
                      """
                      )

                      tree = grammar.parse(file)

                      class PandasVisitor(NodeVisitor):
                      def generic_visit(self, node, visited_children):
                      return visited_children or node

                      def visit_pair(self, node, visited_children):
                      term, _, weight, *_ = visited_children
                      return (term.text, weight.text)

                      def visit_line(self, node, visited_children):
                      id, _, pairs = visited_children
                      return [(id.text, *pair) for pair in pairs]

                      def visit_garbage(self, node, visited_children):
                      return None

                      def visit_expr(self, node, visited_children):
                      return [item
                      for lst in visited_children
                      for sublst in lst if sublst
                      for item in sublst]

                      pv = PandasVisitor()
                      out = pv.visit(tree)

                      df = pd.DataFrame(out, columns=["Id", "Term", "weight"])
                      print(df)


                      This yields



                       Id Term weight
                      0 1 frack 0.733
                      1 1 shale 0.700
                      2 10 space 0.645
                      3 10 station 0.327
                      4 10 nasa 0.258
                      5 4 celebr 0.262
                      6 4 bahar 0.345


                      Here, we are building a grammar with the possible information: either a line or whitespace. The line is built of an id (e.g. 1), followed a colon (:), whitespace and pairs of term and weight evtl. followed by a separator.



                      Afterwards, we need a NodeVisitor class to actually do sth. with the retrieved ast.






                      share|improve this answer



























                        2












                        2








                        2







                        Just to put my two cents in: you could write yourself a parser and feed the result into pandas:



                        import pandas as pd
                        from parsimonious.grammar import Grammar
                        from parsimonious.nodes import NodeVisitor

                        file = """
                        1: frack 0.733, shale 0.700,
                        10: space 0.645, station 0.327, nasa 0.258,
                        4: celebr 0.262, bahar 0.345
                        """

                        grammar = Grammar(
                        r"""
                        expr = (garbage / line)+

                        line = id colon pair*
                        pair = term ws weight sep? ws?
                        garbage = ws+

                        id = ~"d+"
                        colon = ws? ":" ws?
                        sep = ws? "," ws?

                        term = ~"[a-zA-Z]+"
                        weight = ~"d+(?:.d+)?"

                        ws = ~"s+"
                        """
                        )

                        tree = grammar.parse(file)

                        class PandasVisitor(NodeVisitor):
                        def generic_visit(self, node, visited_children):
                        return visited_children or node

                        def visit_pair(self, node, visited_children):
                        term, _, weight, *_ = visited_children
                        return (term.text, weight.text)

                        def visit_line(self, node, visited_children):
                        id, _, pairs = visited_children
                        return [(id.text, *pair) for pair in pairs]

                        def visit_garbage(self, node, visited_children):
                        return None

                        def visit_expr(self, node, visited_children):
                        return [item
                        for lst in visited_children
                        for sublst in lst if sublst
                        for item in sublst]

                        pv = PandasVisitor()
                        out = pv.visit(tree)

                        df = pd.DataFrame(out, columns=["Id", "Term", "weight"])
                        print(df)


                        This yields



                         Id Term weight
                        0 1 frack 0.733
                        1 1 shale 0.700
                        2 10 space 0.645
                        3 10 station 0.327
                        4 10 nasa 0.258
                        5 4 celebr 0.262
                        6 4 bahar 0.345


                        Here, we are building a grammar with the possible information: either a line or whitespace. The line is built of an id (e.g. 1), followed a colon (:), whitespace and pairs of term and weight evtl. followed by a separator.



                        Afterwards, we need a NodeVisitor class to actually do sth. with the retrieved ast.






                        share|improve this answer















                        Just to put my two cents in: you could write yourself a parser and feed the result into pandas:



                        import pandas as pd
                        from parsimonious.grammar import Grammar
                        from parsimonious.nodes import NodeVisitor

                        file = """
                        1: frack 0.733, shale 0.700,
                        10: space 0.645, station 0.327, nasa 0.258,
                        4: celebr 0.262, bahar 0.345
                        """

                        grammar = Grammar(
                        r"""
                        expr = (garbage / line)+

                        line = id colon pair*
                        pair = term ws weight sep? ws?
                        garbage = ws+

                        id = ~"d+"
                        colon = ws? ":" ws?
                        sep = ws? "," ws?

                        term = ~"[a-zA-Z]+"
                        weight = ~"d+(?:.d+)?"

                        ws = ~"s+"
                        """
                        )

                        tree = grammar.parse(file)

                        class PandasVisitor(NodeVisitor):
                        def generic_visit(self, node, visited_children):
                        return visited_children or node

                        def visit_pair(self, node, visited_children):
                        term, _, weight, *_ = visited_children
                        return (term.text, weight.text)

                        def visit_line(self, node, visited_children):
                        id, _, pairs = visited_children
                        return [(id.text, *pair) for pair in pairs]

                        def visit_garbage(self, node, visited_children):
                        return None

                        def visit_expr(self, node, visited_children):
                        return [item
                        for lst in visited_children
                        for sublst in lst if sublst
                        for item in sublst]

                        pv = PandasVisitor()
                        out = pv.visit(tree)

                        df = pd.DataFrame(out, columns=["Id", "Term", "weight"])
                        print(df)


                        This yields



                         Id Term weight
                        0 1 frack 0.733
                        1 1 shale 0.700
                        2 10 space 0.645
                        3 10 station 0.327
                        4 10 nasa 0.258
                        5 4 celebr 0.262
                        6 4 bahar 0.345


                        Here, we are building a grammar with the possible information: either a line or whitespace. The line is built of an id (e.g. 1), followed a colon (:), whitespace and pairs of term and weight evtl. followed by a separator.



                        Afterwards, we need a NodeVisitor class to actually do sth. with the retrieved ast.







                        share|improve this answer














                        share|improve this answer



                        share|improve this answer








                        edited 2 days ago

























                        answered Apr 22 at 20:29









                        JanJan

                        26.1k52750




                        26.1k52750





















                            0














                            Here is another take for your question. Creating a list which will contain lists for every id and term. And then produce the dataframe.



                            import pandas as pd
                            file=r"give_your_path".replace('\', '/')
                            my_list_of_lists=[]#creating an empty list which will contain lists of [Id Term Weight]
                            with open(file,"r+") as f:
                            for line in f.readlines():#looping every line
                            my_id=[line.split(":")[0]]#storing the Id in order to use it in every term
                            for term in [s.strip().split(" ") for s in line[line.find(":")+1:].split(",")[:-1]]:
                            my_list_of_lists.append(my_id+term)
                            df=pd.DataFrame.from_records(my_list_of_lists)#turning the lists to dataframe
                            df.columns=["Id","Term","weight"]#giving columns their names





                            share|improve this answer



























                              0














                              Here is another take for your question. Creating a list which will contain lists for every id and term. And then produce the dataframe.



                              import pandas as pd
                              file=r"give_your_path".replace('\', '/')
                              my_list_of_lists=[]#creating an empty list which will contain lists of [Id Term Weight]
                              with open(file,"r+") as f:
                              for line in f.readlines():#looping every line
                              my_id=[line.split(":")[0]]#storing the Id in order to use it in every term
                              for term in [s.strip().split(" ") for s in line[line.find(":")+1:].split(",")[:-1]]:
                              my_list_of_lists.append(my_id+term)
                              df=pd.DataFrame.from_records(my_list_of_lists)#turning the lists to dataframe
                              df.columns=["Id","Term","weight"]#giving columns their names





                              share|improve this answer

























                                0












                                0








                                0







                                Here is another take for your question. Creating a list which will contain lists for every id and term. And then produce the dataframe.



                                import pandas as pd
                                file=r"give_your_path".replace('\', '/')
                                my_list_of_lists=[]#creating an empty list which will contain lists of [Id Term Weight]
                                with open(file,"r+") as f:
                                for line in f.readlines():#looping every line
                                my_id=[line.split(":")[0]]#storing the Id in order to use it in every term
                                for term in [s.strip().split(" ") for s in line[line.find(":")+1:].split(",")[:-1]]:
                                my_list_of_lists.append(my_id+term)
                                df=pd.DataFrame.from_records(my_list_of_lists)#turning the lists to dataframe
                                df.columns=["Id","Term","weight"]#giving columns their names





                                share|improve this answer













                                Here is another take for your question. Creating a list which will contain lists for every id and term. And then produce the dataframe.



                                import pandas as pd
                                file=r"give_your_path".replace('\', '/')
                                my_list_of_lists=[]#creating an empty list which will contain lists of [Id Term Weight]
                                with open(file,"r+") as f:
                                for line in f.readlines():#looping every line
                                my_id=[line.split(":")[0]]#storing the Id in order to use it in every term
                                for term in [s.strip().split(" ") for s in line[line.find(":")+1:].split(",")[:-1]]:
                                my_list_of_lists.append(my_id+term)
                                df=pd.DataFrame.from_records(my_list_of_lists)#turning the lists to dataframe
                                df.columns=["Id","Term","weight"]#giving columns their names






                                share|improve this answer












                                share|improve this answer



                                share|improve this answer










                                answered Apr 22 at 19:55









                                JoPapou13JoPapou13

                                914




                                914





















                                    0














                                    It is possible to just use entirely pandas:



                                    df = pd.read_csv(StringIO(u"""1: frack 0.733, shale 0.700, 
                                    10: space 0.645, station 0.327, nasa 0.258,
                                    4: celebr 0.262, bahar 0.345 """), sep=":", header=None)

                                    #df:
                                    0 1
                                    0 1 frack 0.733, shale 0.700,
                                    1 10 space 0.645, station 0.327, nasa 0.258,
                                    2 4 celebr 0.262, bahar 0.345


                                    Turn the column 1 into a list and then expand:



                                    df[1] = df[1].str.split(",", expand=False)

                                    dfs = []
                                    for idx, rows in df.iterrows():
                                    print(rows)
                                    dfslice = pd.DataFrame("Id": [rows[0]]*len(rows[1]), "terms": rows[1])
                                    dfs.append(dfslice)
                                    newdf = pd.concat(dfs, ignore_index=True)

                                    # this creates newdf:
                                    Id terms
                                    0 1 frack 0.733
                                    1 1 shale 0.700
                                    2 1
                                    3 10 space 0.645
                                    4 10 station 0.327
                                    5 10 nasa 0.258
                                    6 10
                                    7 4 celebr 0.262
                                    8 4 bahar 0.345


                                    Now we need to str split the last line and drop empties:



                                    newdf["terms"] = newdf["terms"].str.strip()
                                    newdf = newdf.join(newdf["terms"].str.split(" ", expand=True))
                                    newdf.columns = ["Id", "terms", "Term", "Weights"]
                                    newdf = newdf.drop("terms", axis=1).dropna()


                                    Resulting newdf:



                                     Id Term Weights
                                    0 1 frack 0.733
                                    1 1 shale 0.700
                                    3 10 space 0.645
                                    4 10 station 0.327
                                    5 10 nasa 0.258
                                    7 4 celebr 0.262
                                    8 4 bahar 0.345





                                    share|improve this answer



























                                      0














                                      It is possible to just use entirely pandas:



                                      df = pd.read_csv(StringIO(u"""1: frack 0.733, shale 0.700, 
                                      10: space 0.645, station 0.327, nasa 0.258,
                                      4: celebr 0.262, bahar 0.345 """), sep=":", header=None)

                                      #df:
                                      0 1
                                      0 1 frack 0.733, shale 0.700,
                                      1 10 space 0.645, station 0.327, nasa 0.258,
                                      2 4 celebr 0.262, bahar 0.345


                                      Turn the column 1 into a list and then expand:



                                      df[1] = df[1].str.split(",", expand=False)

                                      dfs = []
                                      for idx, rows in df.iterrows():
                                      print(rows)
                                      dfslice = pd.DataFrame("Id": [rows[0]]*len(rows[1]), "terms": rows[1])
                                      dfs.append(dfslice)
                                      newdf = pd.concat(dfs, ignore_index=True)

                                      # this creates newdf:
                                      Id terms
                                      0 1 frack 0.733
                                      1 1 shale 0.700
                                      2 1
                                      3 10 space 0.645
                                      4 10 station 0.327
                                      5 10 nasa 0.258
                                      6 10
                                      7 4 celebr 0.262
                                      8 4 bahar 0.345


                                      Now we need to str split the last line and drop empties:



                                      newdf["terms"] = newdf["terms"].str.strip()
                                      newdf = newdf.join(newdf["terms"].str.split(" ", expand=True))
                                      newdf.columns = ["Id", "terms", "Term", "Weights"]
                                      newdf = newdf.drop("terms", axis=1).dropna()


                                      Resulting newdf:



                                       Id Term Weights
                                      0 1 frack 0.733
                                      1 1 shale 0.700
                                      3 10 space 0.645
                                      4 10 station 0.327
                                      5 10 nasa 0.258
                                      7 4 celebr 0.262
                                      8 4 bahar 0.345





                                      share|improve this answer

























                                        0












                                        0








                                        0







                                        It is possible to just use entirely pandas:



                                        df = pd.read_csv(StringIO(u"""1: frack 0.733, shale 0.700, 
                                        10: space 0.645, station 0.327, nasa 0.258,
                                        4: celebr 0.262, bahar 0.345 """), sep=":", header=None)

                                        #df:
                                        0 1
                                        0 1 frack 0.733, shale 0.700,
                                        1 10 space 0.645, station 0.327, nasa 0.258,
                                        2 4 celebr 0.262, bahar 0.345


                                        Turn the column 1 into a list and then expand:



                                        df[1] = df[1].str.split(",", expand=False)

                                        dfs = []
                                        for idx, rows in df.iterrows():
                                        print(rows)
                                        dfslice = pd.DataFrame("Id": [rows[0]]*len(rows[1]), "terms": rows[1])
                                        dfs.append(dfslice)
                                        newdf = pd.concat(dfs, ignore_index=True)

                                        # this creates newdf:
                                        Id terms
                                        0 1 frack 0.733
                                        1 1 shale 0.700
                                        2 1
                                        3 10 space 0.645
                                        4 10 station 0.327
                                        5 10 nasa 0.258
                                        6 10
                                        7 4 celebr 0.262
                                        8 4 bahar 0.345


                                        Now we need to str split the last line and drop empties:



                                        newdf["terms"] = newdf["terms"].str.strip()
                                        newdf = newdf.join(newdf["terms"].str.split(" ", expand=True))
                                        newdf.columns = ["Id", "terms", "Term", "Weights"]
                                        newdf = newdf.drop("terms", axis=1).dropna()


                                        Resulting newdf:



                                         Id Term Weights
                                        0 1 frack 0.733
                                        1 1 shale 0.700
                                        3 10 space 0.645
                                        4 10 station 0.327
                                        5 10 nasa 0.258
                                        7 4 celebr 0.262
                                        8 4 bahar 0.345





                                        share|improve this answer













                                        It is possible to just use entirely pandas:



                                        df = pd.read_csv(StringIO(u"""1: frack 0.733, shale 0.700, 
                                        10: space 0.645, station 0.327, nasa 0.258,
                                        4: celebr 0.262, bahar 0.345 """), sep=":", header=None)

                                        #df:
                                        0 1
                                        0 1 frack 0.733, shale 0.700,
                                        1 10 space 0.645, station 0.327, nasa 0.258,
                                        2 4 celebr 0.262, bahar 0.345


                                        Turn the column 1 into a list and then expand:



                                        df[1] = df[1].str.split(",", expand=False)

                                        dfs = []
                                        for idx, rows in df.iterrows():
                                        print(rows)
                                        dfslice = pd.DataFrame("Id": [rows[0]]*len(rows[1]), "terms": rows[1])
                                        dfs.append(dfslice)
                                        newdf = pd.concat(dfs, ignore_index=True)

                                        # this creates newdf:
                                        Id terms
                                        0 1 frack 0.733
                                        1 1 shale 0.700
                                        2 1
                                        3 10 space 0.645
                                        4 10 station 0.327
                                        5 10 nasa 0.258
                                        6 10
                                        7 4 celebr 0.262
                                        8 4 bahar 0.345


                                        Now we need to str split the last line and drop empties:



                                        newdf["terms"] = newdf["terms"].str.strip()
                                        newdf = newdf.join(newdf["terms"].str.split(" ", expand=True))
                                        newdf.columns = ["Id", "terms", "Term", "Weights"]
                                        newdf = newdf.drop("terms", axis=1).dropna()


                                        Resulting newdf:



                                         Id Term Weights
                                        0 1 frack 0.733
                                        1 1 shale 0.700
                                        3 10 space 0.645
                                        4 10 station 0.327
                                        5 10 nasa 0.258
                                        7 4 celebr 0.262
                                        8 4 bahar 0.345






                                        share|improve this answer












                                        share|improve this answer



                                        share|improve this answer










                                        answered Apr 22 at 19:58









                                        Rocky LiRocky Li

                                        3,7081719




                                        3,7081719





















                                            0














                                            Could I assume that there is just 1 space before 'TERM'?



                                            df=pd.DataFrame(columns=['ID','Term','Weight'])
                                            with open('C:/random/d1','r') as readObject:
                                            for line in readObject:
                                            line=line.rstrip('n')
                                            tempList1=line.split(':')
                                            tempList2=tempList1[1]
                                            tempList2=tempList2.rstrip(',')
                                            tempList2=tempList2.split(',')
                                            for item in tempList2:
                                            e=item.split(' ')
                                            tempRow=[tempList1[0], e[0],e[1]]
                                            df.loc[len(df)]=tempRow
                                            print(df)





                                            share|improve this answer



























                                              0














                                              Could I assume that there is just 1 space before 'TERM'?



                                              df=pd.DataFrame(columns=['ID','Term','Weight'])
                                              with open('C:/random/d1','r') as readObject:
                                              for line in readObject:
                                              line=line.rstrip('n')
                                              tempList1=line.split(':')
                                              tempList2=tempList1[1]
                                              tempList2=tempList2.rstrip(',')
                                              tempList2=tempList2.split(',')
                                              for item in tempList2:
                                              e=item.split(' ')
                                              tempRow=[tempList1[0], e[0],e[1]]
                                              df.loc[len(df)]=tempRow
                                              print(df)





                                              share|improve this answer

























                                                0












                                                0








                                                0







                                                Could I assume that there is just 1 space before 'TERM'?



                                                df=pd.DataFrame(columns=['ID','Term','Weight'])
                                                with open('C:/random/d1','r') as readObject:
                                                for line in readObject:
                                                line=line.rstrip('n')
                                                tempList1=line.split(':')
                                                tempList2=tempList1[1]
                                                tempList2=tempList2.rstrip(',')
                                                tempList2=tempList2.split(',')
                                                for item in tempList2:
                                                e=item.split(' ')
                                                tempRow=[tempList1[0], e[0],e[1]]
                                                df.loc[len(df)]=tempRow
                                                print(df)





                                                share|improve this answer













                                                Could I assume that there is just 1 space before 'TERM'?



                                                df=pd.DataFrame(columns=['ID','Term','Weight'])
                                                with open('C:/random/d1','r') as readObject:
                                                for line in readObject:
                                                line=line.rstrip('n')
                                                tempList1=line.split(':')
                                                tempList2=tempList1[1]
                                                tempList2=tempList2.rstrip(',')
                                                tempList2=tempList2.split(',')
                                                for item in tempList2:
                                                e=item.split(' ')
                                                tempRow=[tempList1[0], e[0],e[1]]
                                                df.loc[len(df)]=tempRow
                                                print(df)






                                                share|improve this answer












                                                share|improve this answer



                                                share|improve this answer










                                                answered Apr 22 at 20:04









                                                RebinRebin

                                                297312




                                                297312





















                                                    -3














                                                    1) You can read row by row.



                                                    2) Then you can separate by ':' for your index and ',' for the values



                                                    1)



                                                    with open('path/filename.txt','r') as filename:
                                                    content = filename.readlines()


                                                    2)
                                                    content = [x.split(':') for x in content]



                                                    This will give you the following result:



                                                    content =[
                                                    ['1','frack 0.733, shale 0.700,'],
                                                    ['10', 'space 0.645, station 0.327, nasa 0.258,'],
                                                    ['4','celebr 0.262, bahar 0.345 ']]





                                                    share|improve this answer


















                                                    • 3





                                                      Your result is not the result asked for in the question.

                                                      – GiraffeMan91
                                                      Apr 22 at 19:31















                                                    -3














                                                    1) You can read row by row.



                                                    2) Then you can separate by ':' for your index and ',' for the values



                                                    1)



                                                    with open('path/filename.txt','r') as filename:
                                                    content = filename.readlines()


                                                    2)
                                                    content = [x.split(':') for x in content]



                                                    This will give you the following result:



                                                    content =[
                                                    ['1','frack 0.733, shale 0.700,'],
                                                    ['10', 'space 0.645, station 0.327, nasa 0.258,'],
                                                    ['4','celebr 0.262, bahar 0.345 ']]





                                                    share|improve this answer


















                                                    • 3





                                                      Your result is not the result asked for in the question.

                                                      – GiraffeMan91
                                                      Apr 22 at 19:31













                                                    -3












                                                    -3








                                                    -3







                                                    1) You can read row by row.



                                                    2) Then you can separate by ':' for your index and ',' for the values



                                                    1)



                                                    with open('path/filename.txt','r') as filename:
                                                    content = filename.readlines()


                                                    2)
                                                    content = [x.split(':') for x in content]



                                                    This will give you the following result:



                                                    content =[
                                                    ['1','frack 0.733, shale 0.700,'],
                                                    ['10', 'space 0.645, station 0.327, nasa 0.258,'],
                                                    ['4','celebr 0.262, bahar 0.345 ']]





                                                    share|improve this answer













                                                    1) You can read row by row.



                                                    2) Then you can separate by ':' for your index and ',' for the values



                                                    1)



                                                    with open('path/filename.txt','r') as filename:
                                                    content = filename.readlines()


                                                    2)
                                                    content = [x.split(':') for x in content]



                                                    This will give you the following result:



                                                    content =[
                                                    ['1','frack 0.733, shale 0.700,'],
                                                    ['10', 'space 0.645, station 0.327, nasa 0.258,'],
                                                    ['4','celebr 0.262, bahar 0.345 ']]






                                                    share|improve this answer












                                                    share|improve this answer



                                                    share|improve this answer










                                                    answered Apr 22 at 19:30









                                                    CedricLyCedricLy

                                                    11




                                                    11







                                                    • 3





                                                      Your result is not the result asked for in the question.

                                                      – GiraffeMan91
                                                      Apr 22 at 19:31












                                                    • 3





                                                      Your result is not the result asked for in the question.

                                                      – GiraffeMan91
                                                      Apr 22 at 19:31







                                                    3




                                                    3





                                                    Your result is not the result asked for in the question.

                                                    – GiraffeMan91
                                                    Apr 22 at 19:31





                                                    Your result is not the result asked for in the question.

                                                    – GiraffeMan91
                                                    Apr 22 at 19:31

















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